Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs10197915 chr2:30803047 G/A 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10198587 chr2:30685747 T/C 1.5E-8 118 38.33 50.07 33.13 KM Plot
THYM rs10200007 chr2:10956893 T/G 0.000255 119 42.9 38.23 62.72 KM Plot
THYM rs10200589 chr2:30863708 C/T 1.38E-8 119 36.03 50.13 33.13 KM Plot
THYM rs10200895 chr2:30841108 T/C 1.54E-8 118 36.03 50.1 33.13 KM Plot
THYM rs10201020 chr2:30787243 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10204301 chr2:30818006 T/A 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10206659 chr2:30722323 C/T 1.28E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10206668 chr2:30752436 C/T 1.86E-8 117 36.4 50.1 33.13 KM Plot
THYM rs10208299 chr2:30688482 T/C 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs10208587 chr2:30688784 T/C 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs10210365 chr2:30753853 C/T 2.24E-8 117 36.03 50.07 33.13 KM Plot
THYM rs10211659 chr2:30787070 G/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs10225523 chr7:29689735 C/A 4.09E-13 119 38.23 46.07 6 KM Plot
THYM rs10241305 chr7:29689929 T/C 4.09E-13 119 38.23 46.07 6 KM Plot